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59 lines
2.1 KiB
R
59 lines
2.1 KiB
R
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#' Fill NA data cube pixels by simple time series interpolation
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#'
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#' Create a proxy data cube, which fills NA pixels of a data cube by nearest neighbor or linear time series interpolation.
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#'
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#' @examples
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#' # create image collection from example Landsat data only
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#' # if not already done in other examples
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#' if (!file.exists(file.path(tempdir(), "L8.db"))) {
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#' L8_files <- list.files(system.file("L8NY18", package = "gdalcubes"),
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#' ".TIF", recursive = TRUE, full.names = TRUE)
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#' create_image_collection(L8_files, "L8_L1TP", file.path(tempdir(), "L8.db"), quiet = TRUE)
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#' }
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#' L8.col = image_collection(file.path(tempdir(), "L8.db"))
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#' v = cube_view(extent=list(left=388941.2, right=766552.4,
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#' bottom=4345299, top=4744931, t0="2018-01", t1="2018-12"),
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#' srs="EPSG:32618", nx = 497, ny=526, dt="P3M", aggregation = "median")
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#' L8.cube = raster_cube(L8.col, v, mask=image_mask("BQA", bits=4, values=16))
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#' L8.rgb = select_bands(L8.cube, c("B02", "B03", "B04"))
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#' L8.filled = fill_time(L8.rgb, "linear")
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#' L8.filled
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#'
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#' \donttest{
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#' plot(L8.filled, rgb=3:1, zlim=c(5000,12000))
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#' }
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#'
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#' @details
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#'
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#' Please notice that completely empty (NA) time series will not be filled, i.e. the result cube might still contain NA values.
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#'
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#' @param cube source data cube
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#' @param method interpolation method, can be "near" (nearest neighbor), "linear" (linear interpolation), "locf" (last observation carried forward), or "nocb" (next observation carried backward)
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#' @return a proxy data cube object
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#' @note This function returns a proxy object, i.e., it will not start any computations besides deriving the shape of the result.
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#' @export
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fill_time <- function(cube, method="near") {
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stopifnot(is.cube(cube))
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x = gc_create_fill_time_cube(cube, method)
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class(x) <- c("fill_time_cube", "cube", "xptr")
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return(x)
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}
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is.fill_time_cube <- function(obj) {
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if(!("fill_time_cube" %in% class(obj))) {
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return(FALSE)
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}
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if (gc_is_null(obj)) {
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warning("GDAL data cube proxy object is invalid")
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return(FALSE)
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}
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return(TRUE)
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}
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